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{
"name": "Abyss",
"description": "Genome sequence assembler for short reads",
"url": "https://github.com/bcgsc/abyss/releases/download/2.1.5/abyss-2.1.5.tar.gz",
"mirror": null,
"homepage": "http://www.bcgsc.ca/platform/bioinfo/software/abyss",
"depends": [
{
"depend": "autoconf",
"build-depend": true
},
{
"depend": "automake",
"build-depend": true
},
{
"depend": "multimarkdown",
"build-depend": true
},
{
"depend": "boost",
"build-depend": true
},
{
"depend": "google-sparsehash",
"build-depend": true
},
{
"depend": "gcc",
"build-depend": false
},
{
"depend": "open-mpi",
"build-depend": false
}
],
"resource": [],
"conflicts": [],
"patches": [],
"install": [
"system \"./autogen.sh\" if build.head?",
"system \"./configure\", \"--enable-maxk=128\",",
"\"--prefix=#{prefix}\",",
"\"--with-boost=#{Formula[\"boost\"].include}\",",
"\"--with-mpi=#{Formula[\"open-mpi\"].prefix}\",",
"\"--with-sparsehash=#{Formula[\"google-sparsehash\"].prefix}\",",
"\"--disable-dependency-tracking\",",
"\"--disable-silent-rules\"",
"system \"make\", \"install\""
],
"version": "2.1.5",
"file": "abyss.rb"
}
|
